Difference between revisions of "YaaO"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU00270&redirect=T BSU00270]
  
 
* '''DBTBS entry:''' no entry
 
* '''DBTBS entry:''' no entry
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU00270&redirect=T BSU00270]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 12:45, 2 April 2014

  • Description: similar to arginine decarboxylase, but without enzymatic activity

Gene name yaaO
Synonyms
Essential no
Product putative arginine decarboxylase
Function unknown
Gene expression levels in SubtiExpress: yaaO
Metabolic function and regulation of this protein in SubtiPathways:
yaaO
MW, pI 52 kDa, 5.713
Gene length, protein length 1440 bp, 480 aa
Immediate neighbours yaaN, tmk
Sequences Protein DNA DNA_with_flanks
Genetic context
YaaO context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YaaO expression.png















Categories containing this gene/protein

sporulation proteins, poorly characterized/ putative enzymes

This gene is a member of the following regulons

SigW regulon, SigK regulon

The gene

Basic information

  • Locus tag: BSU00270

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

  • the protein was reported to be involved in norspermidine production and biofilm disassembly PubMed; however, this is not the case PubMed

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • the protein was reported to be involved in norspermidine production and biofilm disassembly PubMed; however, this is not the case PubMed
  • Protein family: Orn/Lys/Arg decarboxylase class-I family (according to Swiss-Prot)
  • Paralogous protein(s): SpeA

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Cofactors:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References