Difference between revisions of "YvbW"

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(Basic information/ Evolution)
Line 67: Line 67:
 
* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
  
* '''Protein family:''' secondary amino acid transporter
+
* '''Protein family:'''  
 +
** secondary amino acid transporter
 +
** [[APC superfamily of transport proteins|amino acid, polyamine, organocation (APC) superfamily of transporters]], [http://www.tcdb.org/search/result.php?tc=2.A.3 TC 2.A.3]
  
 
* '''Paralogous protein(s):''' [[AapA]], [[GabP]], [[HutM]], [[RocC]], [[RocE]], [[YbgF]], [[YbxG]], [[YdgF]], [[YtnA]]
 
* '''Paralogous protein(s):''' [[AapA]], [[GabP]], [[HutM]], [[RocC]], [[RocE]], [[YbgF]], [[YbxG]], [[YdgF]], [[YtnA]]

Revision as of 18:53, 28 November 2013

  • Description: putative leucine permease

Gene name yvbW
Synonyms
Essential no
Product putative leucine permease
Function unknown
Gene expression levels in SubtiExpress: yvbW
MW, pI 49 kDa, 9.837
Gene length, protein length 1341 bp, 447 aa
Immediate neighbours yvbV, yvbX
Sequences Protein DNA DNA_with_flanks
Genetic context
YvbW context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YvbW expression.png















Categories containing this gene/protein

transporters/ other, membrane proteins

This gene is a member of the following regulons

T-box

The gene

Basic information

  • Locus tag: BSU34010

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Michiel Wels, Tom Groot Kormelink, Michiel Kleerebezem, Roland J Siezen, Christof Francke
An in silico analysis of T-box regulated genes and T-box evolution in prokaryotes, with emphasis on prediction of substrate specificity of transporters.
BMC Genomics: 2008, 9;330
[PubMed:18625071] [WorldCat.org] [DOI] (I e)