Difference between revisions of "YvbW"
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* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
− | * '''Protein family:''' secondary amino acid transporter | + | * '''Protein family:''' |
+ | ** secondary amino acid transporter | ||
+ | ** [[APC superfamily of transport proteins|amino acid, polyamine, organocation (APC) superfamily of transporters]], [http://www.tcdb.org/search/result.php?tc=2.A.3 TC 2.A.3] | ||
* '''Paralogous protein(s):''' [[AapA]], [[GabP]], [[HutM]], [[RocC]], [[RocE]], [[YbgF]], [[YbxG]], [[YdgF]], [[YtnA]] | * '''Paralogous protein(s):''' [[AapA]], [[GabP]], [[HutM]], [[RocC]], [[RocE]], [[YbgF]], [[YbxG]], [[YdgF]], [[YtnA]] |
Revision as of 18:53, 28 November 2013
- Description: putative leucine permease
Gene name | yvbW |
Synonyms | |
Essential | no |
Product | putative leucine permease |
Function | unknown |
Gene expression levels in SubtiExpress: yvbW | |
MW, pI | 49 kDa, 9.837 |
Gene length, protein length | 1341 bp, 447 aa |
Immediate neighbours | yvbV, yvbX |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
transporters/ other, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU34010
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- secondary amino acid transporter
- amino acid, polyamine, organocation (APC) superfamily of transporters, TC 2.A.3
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O32257
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulatory mechanism:
- T-box: RNA switch, transcriptional antitermination PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Michiel Wels, Tom Groot Kormelink, Michiel Kleerebezem, Roland J Siezen, Christof Francke
An in silico analysis of T-box regulated genes and T-box evolution in prokaryotes, with emphasis on prediction of substrate specificity of transporters.
BMC Genomics: 2008, 9;330
[PubMed:18625071]
[WorldCat.org]
[DOI]
(I e)