Difference between revisions of "AraE"

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(Basic information/ Evolution)
(Basic information/ Evolution)
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* '''Protein family:'''
 
* '''Protein family:'''
  
* '''Paralogous protein(s):''' [[CsbC]], [[YdjK]], [[YfiG]], [[YncC]], [[YwtG]]
+
* '''Paralogous protein(s):''' [[CsbC]], [[IolT]], [[YfiG]], [[YncC]], [[YwtG]]
  
 
=== Extended information on the protein ===
 
=== Extended information on the protein ===

Revision as of 12:50, 20 August 2013

  • Description: L-arabinose permease

Gene name araE
Synonyms yvbR
Essential no
Product L-arabinose permease
Function uptake of arabinose, galactose and xylose
Gene expression levels in SubtiExpress: araE
Metabolic function and regulation of this protein in SubtiPathways:
Sugar catabolism
MW, pI 50 kDa, 9.259
Gene length, protein length 1392 bp, 464 aa
Immediate neighbours cggR, araR
Sequences Protein DNA DNA_with_flanks
Genetic context
AraE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AraE expression.png















Categories containing this gene/protein

transporters/ other, utilization of specific carbon sources, membrane proteins

This gene is a member of the following regulons

AraR regulon, CcpA regulon

The gene

Basic information

  • Locus tag: BSU33960

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: transports arabinose, and also xylose and galactose PubMed
  • Protein family:

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
    • 4JA4 (the xylose transporter XylE from E. coli, 39% identity, 68% similarity) PubMed
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References