Difference between revisions of "Pdp"
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[hutM]]'', ''[[nupC]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[hutM]]'', ''[[nupC]]'' | ||
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| − | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU39400 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU39400 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU39400 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU39400 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU39400 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU39400 DNA_with_flanks] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:pdp_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:pdp_context.gif]] | ||
Revision as of 11:40, 14 May 2013
- Description: pyrimidine nucleoside phosphorylase
| Gene name | pdp |
| Synonyms | |
| Essential | no |
| Product | pyrimidine nucleoside phosphorylase |
| Function | pyrimidine interconversion |
| Gene expression levels in SubtiExpress: pdp | |
| Metabolic function and regulation of this protein in SubtiPathways: Nucleoside catabolism, Nucleotides (regulation) | |
| MW, pI | 46 kDa, 4.765 |
| Gene length, protein length | 1299 bp, 433 aa |
| Immediate neighbours | hutM, nupC |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU39400
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: A pyrimidine nucleoside + phosphate = a pyrimidine base + alpha-D-ribose 1-phosphate (according to Swiss-Prot)
- Protein family: thymidine/pyrimidine-nucleoside phosphorylase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure: 1BRW (Geobacillus stearothermophilus)
- UniProt: P39142
- KEGG entry: [3]
- E.C. number: 2.4.2.2
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
