Difference between revisions of "ComFA"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[comFB]]'', ''[[yviA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[comFB]]'', ''[[yviA]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35470 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35470 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35470 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35470 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35470 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35470 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:comFA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:comFA_context.gif]]

Revision as of 11:24, 14 May 2013

  • Description: late competence protein required for DNA binding and uptake

Gene name comFA
Synonyms
Essential no
Product ATP-binding protein
Function genetic competence
Gene expression levels in SubtiExpress: comFA
Interactions involving this protein in SubtInteract: ComFA
Metabolic function and regulation of this protein in SubtiPathways:
Protein secretion
MW, pI 52 kDa, 9.824
Gene length, protein length 1389 bp, 463 aa
Immediate neighbours comFB, yviA
Sequences Protein DNA DNA_with_flanks
Genetic context
ComFA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
ComFA expression.png
























Categories containing this gene/protein

genetic competence, membrane proteins, phosphoproteins

This gene is a member of the following regulons

ComK regulon

The gene

Basic information

  • Locus tag: BSU35470

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: helicase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
    • phosphorylated on Arg-20, Arg-186, and Arg-446 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Original publications

Additional publications: PubMed