Difference between revisions of "SspI"
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|style="background:#ABCDEF;" align="center"|'''Function''' || protection of spore DNA | |style="background:#ABCDEF;" align="center"|'''Function''' || protection of spore DNA | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU28660 sspI] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 4.486 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 4.486 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ysgA]]'', ''[[ysfB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ysgA]]'', ''[[ysfB]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU28660 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU28660 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU28660 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:sspI_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:sspI_context.gif]] | ||
Revision as of 13:32, 13 May 2013
- Description: small acid-soluble spore protein (minor), SASP
| Gene name | sspI |
| Synonyms | ysfA |
| Essential | no |
| Product | small acid-soluble spore protein (minor), SASP |
| Function | protection of spore DNA |
| Gene expression levels in SubtiExpress: sspI | |
| MW, pI | 7 kDa, 4.486 |
| Gene length, protein length | 213 bp, 71 aa |
| Immediate neighbours | ysgA, ysfB |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU28660
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: sspI family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P94537
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: sspI PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Stephanie T Wang, Barbara Setlow, Erin M Conlon, Jessica L Lyon, Daisuke Imamura, Tsutomu Sato, Peter Setlow, Richard Losick, Patrick Eichenberger
The forespore line of gene expression in Bacillus subtilis.
J Mol Biol: 2006, 358(1);16-37
[PubMed:16497325]
[WorldCat.org]
[DOI]
(P p)
A Cabrera-Hernandez, P Setlow
Analysis of the regulation and function of five genes encoding small, acid-soluble spore proteins of Bacillus subtilis.
Gene: 2000, 248(1-2);169-81
[PubMed:10806362]
[WorldCat.org]
[DOI]
(P p)
