Difference between revisions of "GlyQ"
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|style="background:#ABCDEF;" align="center"|'''Function''' || [[translation]] | |style="background:#ABCDEF;" align="center"|'''Function''' || [[translation]] | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU25270 glyQ] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/GlyQ GlyQ] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/GlyQ GlyQ] | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[glyS]]'', ''[[recO]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[glyS]]'', ''[[recO]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU25270 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU25270 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU25270 Advanced_DNA] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:glyQ_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:glyQ_context.gif]] | ||
Revision as of 13:20, 13 May 2013
- Description: glycyl-tRNA synthetase (alpha subunit)
| Gene name | glyQ |
| Synonyms | yqfJ |
| Essential | yes PubMed |
| Product | glycyl-tRNA synthetase (alpha subunit) |
| Function | translation |
| Gene expression levels in SubtiExpress: glyQ | |
| Interactions involving this protein in SubtInteract: GlyQ | |
| Metabolic function and regulation of this protein in SubtiPathways: tRNA charging | |
| MW, pI | 33 kDa, 4.8 |
| Gene length, protein length | 885 bp, 295 aa |
| Immediate neighbours | glyS, recO |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU25270
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly) (according to Swiss-Prot)
- Protein family: class-II aminoacyl-tRNA synthetase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure: 1J5W (from Thermotoga maritima, 55% identity, 72% similarity)
- UniProt: P54380
- KEGG entry: [3]
- E.C. number: 6.1.1.14
Additional information
Expression and regulation
- Sigma factor:
- Regulatory mechanism:
- T-box: RNA switch, transcriptional antitermination PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
