Difference between revisions of "GmuB"
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|style="background:#ABCDEF;" align="center"|'''Function''' || glucomannan uptake and phosphorylation | |style="background:#ABCDEF;" align="center"|'''Function''' || glucomannan uptake and phosphorylation | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU05810 gmuB] |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/GmuB GmuB] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/GmuB GmuB] | ||
| Line 25: | Line 25: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pbuE]]'', ''[[gmuA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pbuE]]'', ''[[gmuA]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU05810 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU05810 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU05810 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:ydhM_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ydhM_context.gif]] | ||
Revision as of 12:15, 13 May 2013
- Description: glucomannan-specific phosphotransferase system, EIIB component of the PTS
| Gene name | gmuB |
| Synonyms | ydhM |
| Essential | no |
| Product | glucomannan-specific phosphotransferase system EIIB component |
| Function | glucomannan uptake and phosphorylation |
| Gene expression levels in SubtiExpress: gmuB | |
| Interactions involving this protein in SubtInteract: GmuB | |
| Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
| MW, pI | 11 kDa, 4.724 |
| Gene length, protein length | 309 bp, 103 aa |
| Immediate neighbours | pbuE, gmuA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
phosphotransferase systems, utilization of specific carbon sources, phosphoproteins
This gene is a member of the following regulons
AbrB regulon, CcpA regulon, GmuR regulon
The gene
Basic information
- Locus tag: BSU05810
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O05505
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Bogumiła C Marciniak, Monika Pabijaniak, Anne de Jong, Robert Dűhring, Gerald Seidel, Wolfgang Hillen, Oscar P Kuipers
High- and low-affinity cre boxes for CcpA binding in Bacillus subtilis revealed by genome-wide analysis.
BMC Genomics: 2012, 13;401
[PubMed:22900538]
[WorldCat.org]
[DOI]
(I e)
Yoshito Sadaie, Hisashi Nakadate, Reiko Fukui, Lii Mien Yee, Kei Asai
Glucomannan utilization operon of Bacillus subtilis.
FEMS Microbiol Lett: 2008, 279(1);103-9
[PubMed:18177310]
[WorldCat.org]
[DOI]
(P p)
Jonathan Reizer, Steffi Bachem, Aiala Reizer, Maryvonne Arnaud, Milton H Saier, Jörg Stülke
Novel phosphotransferase system genes revealed by genome analysis - the complete complement of PTS proteins encoded within the genome of Bacillus subtilis.
Microbiology (Reading): 1999, 145 ( Pt 12);3419-3429
[PubMed:10627040]
[WorldCat.org]
[DOI]
(P p)
