Difference between revisions of "YaaO"
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|style="background:#ABCDEF;" align="center"|'''Function''' || synthesis of norspermidine | |style="background:#ABCDEF;" align="center"|'''Function''' || synthesis of norspermidine | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU00270 yaaO] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/gene_regulation_nucleotides.html Nucleotides (regulation)]''' | |colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/gene_regulation_nucleotides.html Nucleotides (regulation)]''' | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yaaN]]'', ''[[tmk]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yaaN]]'', ''[[tmk]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU00270 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU00270 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU00270 Advanced_DNA] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:yaaO_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yaaO_context.gif]] | ||
Revision as of 11:53, 13 May 2013
- Description: carboxynorspermidine decarboxylase
| Gene name | yaaO |
| Synonyms | |
| Essential | no |
| Product | carboxynorspermidine decarboxylase |
| Function | synthesis of norspermidine |
| Gene expression levels in SubtiExpress: yaaO | |
| Metabolic function and regulation of this protein in SubtiPathways: Nucleotides (regulation) | |
| MW, pI | 52 kDa, 5.713 |
| Gene length, protein length | 1440 bp, 480 aa |
| Immediate neighbours | yaaN, tmk |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
miscellaneous metabolic pathways, biofilm formation, sporulation proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU00270
Phenotypes of a mutant
- impaired biofilm disassembly PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- catalyzes the last step in norspermidine synthesis PubMed
- Protein family: Orn/Lys/Arg decarboxylase class-I family (according to Swiss-Prot)
- Paralogous protein(s): SpeA
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P37536
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
