Difference between revisions of "YcgG"

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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ycgG_335329_336090_1 ycgG] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ycgG_335329_336090_1 ycgG] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigE]] {{PubMed|12662922}}
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* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|12662922}}
  
 
* '''Regulation:''' subject to negative regulation by [[SpoIIID]] {{PubMed|15383836}}
 
* '''Regulation:''' subject to negative regulation by [[SpoIIID]] {{PubMed|15383836}}
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=References=
 
=References=
<pubmed>12662922, 15383836  </pubmed>
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<pubmed>12662922, 15383836  23420519 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 09:12, 20 February 2013

  • Description: unknown

Gene name ycgG
Synonyms
Essential yes PubMed
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ycgG
MW, pI 29 kDa, 9.185
Gene length, protein length 759 bp, 253 aa
Immediate neighbours ycgF, ycgH
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YcgG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YcgG expression.png















Categories containing this gene/protein

sporulation proteins, essential genes

This gene is a member of the following regulons

SigE regulon

The gene

Basic information

  • Locus tag: BSU03100

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): YqcI

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Fabian M Commichau, Nico Pietack, Jörg Stülke
Essential genes in Bacillus subtilis: a re-evaluation after ten years.
Mol Biosyst: 2013, 9(6);1068-75
[PubMed:23420519] [WorldCat.org] [DOI] (I p)

Patrick Eichenberger, Masaya Fujita, Shane T Jensen, Erin M Conlon, David Z Rudner, Stephanie T Wang, Caitlin Ferguson, Koki Haga, Tsutomu Sato, Jun S Liu, Richard Losick
The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.
PLoS Biol: 2004, 2(10);e328
[PubMed:15383836] [WorldCat.org] [DOI] (I p)

Patrick Eichenberger, Shane T Jensen, Erin M Conlon, Christiaan van Ooij, Jessica Silvaggi, José Eduardo González-Pastor, Masaya Fujita, Sigal Ben-Yehuda, Patrick Stragier, Jun S Liu, Richard Losick
The sigmaE regulon and the identification of additional sporulation genes in Bacillus subtilis.
J Mol Biol: 2003, 327(5);945-72
[PubMed:12662922] [WorldCat.org] [DOI] (P p)