Difference between revisions of "RibC"

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|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no
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|style="background:#ABCDEF;" align="center"| '''Essential''' || yes {{PubMed|23109554}}
 
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|style="background:#ABCDEF;" align="center"| '''Product''' || riboflavin kinase / FAD synthase
 
|style="background:#ABCDEF;" align="center"| '''Product''' || riboflavin kinase / FAD synthase
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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[biosynthesis of cofactors]]}}
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{{SubtiWiki category|[[biosynthesis of cofactors]]}},
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{{SubtiWiki category|[[essential genes]]}}
  
 
= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
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===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
 
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* essential {{PubMed|23109554}}
 
=== Database entries ===
 
=== Database entries ===
  
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=References=
 
=References=
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'''Additional publications:''' {{PubMed|23109554}}
 
<pubmed> 15468322</pubmed>
 
<pubmed> 15468322</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 13:12, 31 October 2012

  • Description: riboflavin kinase / FAD synthase

Gene name ribC
Synonyms
Essential yes PubMed
Product riboflavin kinase / FAD synthase
Function FAD biosynthesis
Gene expression levels in SubtiExpress: ribC
Metabolic function and regulation of this protein in SubtiPathways:
Riboflavin / FAD
MW, pI 35 kDa, 8.3
Gene length, protein length 948 bp, 316 aa
Immediate neighbours truB, rpsO
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RibC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RibC expression.png















Categories containing this gene/protein

biosynthesis of cofactors, essential genes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU16670

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + riboflavin = ADP + FMN (according to Swiss-Prot)
  • Protein family: ribF family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1S4M (from Thermotoga maritima, 33% identity, 54% similarity) PubMed
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed