Difference between revisions of "GerE"

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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of [[SigK]]-dependent gene expression
 
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of [[SigK]]-dependent gene expression
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU28410 gerE]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/phosphorelay.html Phosphorelay], [http://subtiwiki.uni-goettingen.de/wiki/index.php/Protein_secretion Protein secretion]'''
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/phosphorelay.html Phosphorelay], [http://subtiwiki.uni-goettingen.de/wiki/index.php/Protein_secretion Protein secretion]'''

Revision as of 14:37, 7 August 2012

  • Description: transcriptional regulator (repressor or activator) of a subset of sigma-K-dependent late spore coat genes

Gene name gerE
Synonyms
Essential no
Product transcriptional regulator (LuxR-FixJ family)
Function regulation of SigK-dependent gene expression
Gene expression levels in SubtiExpress: gerE
Function and regulation of this protein in SubtiPathways:
Phosphorelay, Protein secretion
MW, pI 8 kDa, 9.635
Gene length, protein length 222 bp, 74 aa
Immediate neighbours ysmB, ysmA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
GerE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
GerE expression.png




























Categories containing this gene/protein

transcription factors and their control, germination

This gene is a member of the following regulons

SigK regulon

The GerE regulon

The gene

Basic information

  • Locus tag: BSU28410

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: LuxR-FixJ family of transcription regulators
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References