Difference between revisions of "AmiE"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''[[murQ]]-[[murR]]-[[murP]]-[[amiE]]-[[nagZ]]-[[ybbC]]'' {{PubMed|22383849}} |
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ybbE_188408_189733_-1 amiE] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ybbE_188408_189733_-1 amiE] {{PubMed|22383849}} | ||
| Line 140: | Line 140: | ||
=References= | =References= | ||
| − | <pubmed>10627040, 20400549 </pubmed> | + | <pubmed>10627040, 20400549 22383849</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 16:19, 19 April 2012
- Description: N-acetylmuramyl-L-alanine amidase
| Gene name | amiE |
| Synonyms | ybbE |
| Essential | no |
| Product | N-acetylmuramyl-L-alanine amidase |
| Function | recycling of cell wall material |
| Metabolic function and regulation of this protein in SubtiPathways: Murein recycling | |
| MW, pI | 49 kDa, 9.349 |
| Gene length, protein length | 1323 bp, 441 aa |
| Immediate neighbours | nagZ, murP |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
cell wall degradation/ turnover
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU01670
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: hydrolyzes the amide bond between MurNAc and the L-alanine residue of the stem peptide PubMed
- Protein family: UPF0214 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O05213
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
