Difference between revisions of "CotD"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk)
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* '''Operon:''' ''cotD'' (according to [http://dbtbs.hgc.jp/COG/prom/cotD.html DBTBS])
 
* '''Operon:''' ''cotD'' (according to [http://dbtbs.hgc.jp/COG/prom/cotD.html DBTBS])
  
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190}}
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cotD_2332784_2333011_-1 cotD] {{PubMed|22383849}}
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* '''Sigma factor:''' [[SigK]] {{PubMed|15699190}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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** [[SpoIIID]]: transcription repression {{PubMed|7966271}}
 
** [[SpoIIID]]: transcription repression {{PubMed|7966271}}
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 08:45, 16 April 2012

  • Description: spore coat protein (inner)

Gene name cotD
Synonyms
Essential no
Product spore coat protein (inner)
Function resistance of the spore
MW, pI 8 kDa, 7.373
Gene length, protein length 225 bp, 75 aa
Immediate neighbours ypsA, yprB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
CotD context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

GerE regulon, SigK regulon, SpoIIID regulon

The gene

Basic information

  • Locus tag: BSU22200

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: nhaC Na(+)/H(+) antiporter family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: cotD (according to DBTBS)
  • Regulation:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References