Difference between revisions of "YplP"

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* '''[[Sigma factor]]:'''  
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yplP_2294286_2295281_1 yplP] {{PubMed|22383849}}
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Revision as of 08:34, 16 April 2012

Gene name yplP
Synonyms
Essential no
Product transcriptional activator (for SigL-dependent promoter)
Function required for survival at low temperatures
Interactions involving this protein in SubtInteract: YplP
MW, pI 37 kDa, 9.295
Gene length, protein length 993 bp, 331 aa
Immediate neighbours ilvA, yplQ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YplP context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

transcription factors and their control, cold stress proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU21780

Phenotypes of a mutant

The mutant is cold-sensitive PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
    • induced by cold shock (9-fold) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Frank Wiegeshoff, Carsten L Beckering, Michel Debarbouille, Mohamed A Marahiel
Sigma L is important for cold shock adaptation of Bacillus subtilis.
J Bacteriol: 2006, 188(8);3130-3
[PubMed:16585774] [WorldCat.org] [DOI] (P p)

Carsten L Beckering, Leif Steil, Michael H W Weber, Uwe Völker, Mohamed A Marahiel
Genomewide transcriptional analysis of the cold shock response in Bacillus subtilis.
J Bacteriol: 2002, 184(22);6395-402
[PubMed:12399512] [WorldCat.org] [DOI] (P p)