Difference between revisions of "YneF"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Lflorez)
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* '''Operon:''' ''[[sirA]]-[[yneF]]'' {{PubMed|9068642}}
 
* '''Operon:''' ''[[sirA]]-[[yneF]]'' {{PubMed|9068642}}
  
* '''[[Sigma factor]]:'''  
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yneF_1922549_1922767_1 yneF] {{PubMed|22383849}}
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* '''Sigma factor:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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** [[Spo0A]]: transcription activation {{PubMed|14651647,19329632}}
 
** [[Spo0A]]: transcription activation {{PubMed|14651647,19329632}}
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 09:48, 13 April 2012

  • Description: membrane protein

Gene name yneF
Synonyms yoxG
Essential no
Product unknown
Function unknown
MW, pI 8 kDa, 11.043
Gene length, protein length 216 bp, 72 aa
Immediate neighbours yneE, ynzD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YneF context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

membrane proteins

This gene is a member of the following regulons

Spo0A regulon

The gene

Basic information

  • Locus tag: BSU17910

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0154 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • expressed under conditions that trigger sporulation (Spo0A) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Lilah Rahn-Lee, Boris Gorbatyuk, Ole Skovgaard, Richard Losick
The conserved sporulation protein YneE inhibits DNA replication in Bacillus subtilis.
J Bacteriol: 2009, 191(11);3736-9
[PubMed:19329632] [WorldCat.org] [DOI] (I p)

Virginie Molle, Masaya Fujita, Shane T Jensen, Patrick Eichenberger, José E González-Pastor, Jun S Liu, Richard Losick
The Spo0A regulon of Bacillus subtilis.
Mol Microbiol: 2003, 50(5);1683-701
[PubMed:14651647] [WorldCat.org] [DOI] (P p)

T Schiött, C von Wachenfeldt, L Hederstedt
Identification and characterization of the ccdA gene, required for cytochrome c synthesis in Bacillus subtilis.
J Bacteriol: 1997, 179(6);1962-73
[PubMed:9068642] [WorldCat.org] [DOI] (P p)