Difference between revisions of "GerR"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk)
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* '''Operon:''' ''gerR'' (according to [http://dbtbs.hgc.jp/COG/prom/gerR.html DBTBS])
 
* '''Operon:''' ''gerR'' (according to [http://dbtbs.hgc.jp/COG/prom/gerR.html DBTBS])
  
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}}
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ylbO_1576129_1576710_1 gerR] {{PubMed|22383849}}
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* '''Sigma factor:''' [[SigE]] {{PubMed|15699190}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 08:22, 13 April 2012

  • Description: probably DNA-binding protein, regulates transcription of some spore coat genes

Gene name gerR
Synonyms ylbO
Essential no
Product unknown
Function spore coat formation and resistance of spores to lysozyme
MW, pI 22 kDa, 7.109
Gene length, protein length 579 bp, 193 aa
Immediate neighbours rpmF, ylbP
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YlbO context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

transcription factors and their control, sporulation proteins

This gene is a member of the following regulons

SigE regulon, SpoIIID regulon

The GerR regulon

The gene

Basic information

  • Locus tag: BSU15090

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylated on Ser-180 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: gerR (according to DBTBS)
  • Regulation:
    • expressed during sporulation in the mother cell (SigE, SpoIIID) PubMed
    • repressed by glucose (3.2-fold) PubMed
    • repressed by casamino acids PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References