Difference between revisions of "YdhU/1"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk)
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* '''Operon:''' ''ydhU'' {{PubMed|12354229}}  
 
* '''Operon:''' ''ydhU'' {{PubMed|12354229}}  
  
* '''[[Sigma factor]]:'''  
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ydhU_633923_634651_-1 ydhU/1] {{PubMed|22383849}}
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* '''Sigma factor:'''  
  
 
* '''Regulation:''' induced by iron starvation ([[Fur]]) {{PubMed|12354229}}  
 
* '''Regulation:''' induced by iron starvation ([[Fur]]) {{PubMed|12354229}}  
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* '''Regulatory mechanism:''' Fur: transcription repression {{PubMed|12354229}}  
 
* '''Regulatory mechanism:''' Fur: transcription repression {{PubMed|12354229}}  
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 15:15, 12 April 2012

  • Description: similar to Mn catalase, inactive pseudogene in strain 168

Gene name ydhU/1
Synonyms ydhU
Essential no
Product unknown
Function unknown
MW, pI - , -
Gene length, protein length 729 bp, -
Immediate neighbours gmuG, ydhU/2
Gene sequence (+200bp) Protein sequence
Genetic context
YdhU context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

resistance against oxidative and electrophile stress, pseudogenes

This gene is a member of the following regulons

Fur regulon

The gene

Basic information

  • Locus tag: BSU05890

Phenotypes of a mutant

thsi is a pseudogene in B. subtilis 168

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: manganese catalase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation: induced by iron starvation (Fur) PubMed
  • Regulatory mechanism: Fur: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References