Difference between revisions of "YoaB"

From SubtiWiki
Jump to: navigation, search
Line 46: Line 46:
  
 
* '''Locus tag:''' BSU18540
 
* '''Locus tag:''' BSU18540
 +
 +
[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yoaB_2021223_2022467_-1 Expression]
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===

Revision as of 10:37, 25 January 2012

  • Description: 2-oxoglutarate permease (proton symporter)

Gene name yoaB
Synonyms
Essential no
Product 2-oxoglutarate permease (proton symporter)
Function uptake of alpha-ketoglutarate
Metabolic function and regulation of this protein in SubtiPathways:
Central C-metabolism
MW, pI 45 kDa, 9.413
Gene length, protein length 1242 bp, 414 aa
Immediate neighbours yoaA, yoaC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YoaB context.gif
This image was kindly provided by SubtiList







Categories containing this gene/protein

transporters/ other, utilization of specific carbon sources, membrane proteins

This gene is a member of the following regulons

S-box

The gene

Basic information

  • Locus tag: BSU18540

Expression

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: acetyltransferase family (according to Swiss-Prot)
  • Paralogous protein(s): CsbX

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: membrane PubMed

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism: S-box: transcription termination/ antitermination, the S-box riboswitch binds S-adenosylmethionine resulting in termination PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References