Difference between revisions of "YhaM"

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(This gene is a member of the following regulons)
(This gene is a member of the following regulons)
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= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[LexA regulon]]}}
+
{{SubtiWiki regulon|[[LexA regulon]]}},
 
{{SubtiWiki regulon|[[CcpN regulon]]}}
 
{{SubtiWiki regulon|[[CcpN regulon]]}}
  

Revision as of 14:23, 8 June 2011

  • Description: RNase, 3'-> 5' exoribonuclease

Gene name yhaM
Synonyms
Essential no
Product RNase YhaM
Function RNA degradation
MW, pI 35 kDa, 5.851
Gene length, protein length 942 bp, 314 aa
Immediate neighbours sbcE, yhaL
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YhaM context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

Rnases

This gene is a member of the following regulons

LexA regulon, CcpN regulon

The gene

Basic information

  • Locus tag: BSU09930

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: 3'-5' exoribonuclease
  • Protein family: OB DNA-binding domain (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: Cytoplasm (Homogeneous) PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

  • subject to Clp-dependent proteolysis upon glucose starvation PubMed

Expression and regulation

  • Regulatory mechanism:
  • Additional information: subject to Clp-dependent proteolysis upon glucose starvation PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

David Bechhofer, Mount Sinai School, New York, USA Homepage

Your additional remarks

References