Difference between revisions of "VmlR"
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
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* '''Additional information:''' | * '''Additional information:''' | ||
| + | ** A [[ncRNA]] is predicted between ''[[vmlR]]'' and ''[[ydgF]]'' {{PubMed|20525796}} | ||
=Biological materials = | =Biological materials = | ||
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=References= | =References= | ||
| − | <pubmed>10092453,16109936 , </pubmed> | + | <pubmed>10092453,16109936 , 20525796</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 18:30, 4 May 2011
- Description: ABC transporter (ATP-binding protein), efflux of antibiotics (virginiamycin M, lincomycin)
| Gene name | vmlR |
| Synonyms | expZ |
| Essential | no |
| Product | antibiotic efflux ABC transporter (ATP-binding protein) |
| Function | efflux of antibiotics (virginiamycin M, lincomycin) |
| MW, pI | 62 kDa, 6.727 |
| Gene length, protein length | 1641 bp, 547 aa |
| Immediate neighbours | ydgE, ydgF |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
ABC transporters, resistance against toxins/ antibiotics
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU05610
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ABC transporter family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P39115
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon: vmlR PubMed
- Regulation: induced by virginiamycin M or lincomycin PubMed
- Regulatory mechanism: transcriptional antitermination, details are unknown PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
