Difference between revisions of "YetO"

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(Database entries)
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=== Database entries ===
 
=== Database entries ===
  
* '''Structure:'''
+
* '''Structure:''' [http://www.pdb.org/pdb/explore/explore.do?structureId=2X7Y 2X7Y] (from ''Bacillus megaterium''; 66% identity, 87% similarity)
  
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/O08394 O08394]
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/O08394 O08394]

Revision as of 20:15, 27 April 2011

Gene name yetO
Synonyms yfnJ , cypD
Essential no
Product NADPH-cytochrome P450 reductase
Function fatty acid metabolism
MW, pI 119 kDa, 5.732
Gene length, protein length 3183 bp, 1061 aa
Immediate neighbours yetN, yfnI
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YetO context.gif
This image was kindly provided by SubtiList




Categories containing this gene/protein

electron transport/ other, lipid metabolism/ other

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU07250

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • oxidation of even- and odd-chain saturated and unsaturated fatty acids to the respective omega-3, omega-2 and omega-1 hydroxylated fatty acids PubMed
  • Protein family:
  • Paralogous protein(s): YrhJ

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • Structure: 2X7Y (from Bacillus megaterium; 66% identity, 87% similarity)
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References