Difference between revisions of "YvrP"

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=Expression and regulation=
 
=Expression and regulation=
* '''Operon:''' ''[[yvrP]]-[[yvrO]]-[[yvrN]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yvrPON.html DBTBS])
+
* '''Operon:''' ''[[yvrP]]-[[yvrO]]-[[yvrN]]'' {{PubMed|20817675}}
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  
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* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 
** [[ComK]]: transcription activation {{PubMed|11948146}}
 
** [[ComK]]: transcription activation {{PubMed|11948146}}
 +
** [[AbrB]]: transcription repression {{PubMed|20817675}}
  
 
* '''Additional information:'''  
 
* '''Additional information:'''  
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=References=
 
=References=
<pubmed>11948146 </pubmed>
+
<pubmed>11948146 20817675</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 20:22, 15 September 2010

  • Description: unknown

Gene name yvrP
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 43 kDa, 4.615
Gene length, protein length 1191 bp, 397 aa
Immediate neighbours yvrO, fhuC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YvrP context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU33280

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Onuma Chumsakul, Hiroki Takahashi, Taku Oshima, Takahiro Hishimoto, Shigehiko Kanaya, Naotake Ogasawara, Shu Ishikawa
Genome-wide binding profiles of the Bacillus subtilis transition state regulator AbrB and its homolog Abh reveals their interactive role in transcriptional regulation.
Nucleic Acids Res: 2011, 39(2);414-28
[PubMed:20817675] [WorldCat.org] [DOI] (I p)

Mitsuo Ogura, Hirotake Yamaguchi, Kazuo Kobayashi, Naotake Ogasawara, Yasutaro Fujita, Teruo Tanaka
Whole-genome analysis of genes regulated by the Bacillus subtilis competence transcription factor ComK.
J Bacteriol: 2002, 184(9);2344-51
[PubMed:11948146] [WorldCat.org] [DOI] (P p)