Difference between revisions of "VmlR"
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| − | * '''Description:''' ATP-binding | + | * '''Description:''' [[ABC transporter]] (ATP-binding protein), efflux of antibiotics (virginiamycin M, lincomycin) <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
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| − | |style="background:#ABCDEF;" align="center"| '''Product''' || antibiotic efflux ATP-binding | + | |style="background:#ABCDEF;" align="center"| '''Product''' || antibiotic efflux [[ABC transporter]] (ATP-binding protein) |
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || efflux of antibiotics (virginiamycin M, lincomycin) | |style="background:#ABCDEF;" align="center"|'''Function''' || efflux of antibiotics (virginiamycin M, lincomycin) | ||
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* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
| − | * '''Protein family:''' ABC transporter family (according to Swiss-Prot) | + | * '''Protein family:''' [[ABC transporter]] family (according to Swiss-Prot) |
* '''Paralogous protein(s):''' | * '''Paralogous protein(s):''' | ||
Revision as of 06:13, 12 January 2010
- Description: ABC transporter (ATP-binding protein), efflux of antibiotics (virginiamycin M, lincomycin)
| Gene name | vmlR |
| Synonyms | expZ |
| Essential | no |
| Product | antibiotic efflux ABC transporter (ATP-binding protein) |
| Function | efflux of antibiotics (virginiamycin M, lincomycin) |
| MW, pI | 62 kDa, 6.727 |
| Gene length, protein length | 1641 bp, 547 aa |
| Immediate neighbours | ydgE, ydgF |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU05610
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ABC transporter family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P39115
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon: vmlR PubMed
- Regulation: induced by virginiamycin M or lincomycin PubMed
- Regulatory mechanism: transcriptional antitermination, details are unknown PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
