Difference between revisions of "SspD"
| Line 88: | Line 88: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''sspD'' {{PubMed|3009398}} |
* '''[[Sigma factor]]:''' [[SigG]] {{PubMed|15699190}} | * '''[[Sigma factor]]:''' [[SigG]] {{PubMed|15699190}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| + | ** expressed during sporulation in the forespore ([[SigG]], [[SpoVT]]) {{PubMed|15699190,8755877}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[SpoVT]]: transcription activation {{PubMed|8755877}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 118: | Line 120: | ||
=References= | =References= | ||
| − | <pubmed>3009398,, </pubmed> | + | <pubmed>3009398,15699190,8755877 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 19:26, 3 October 2009
- Description: small acid-soluble spore protein (minor alpha/beta-type SASP)
| Gene name | sspD |
| Synonyms | |
| Essential | no |
| Product | small acid-soluble spore protein (minor alpha/beta-type SASP) |
| Function | protection of spore DNA |
| MW, pI | 6 kDa, 8.945 |
| Gene length, protein length | 192 bp, 64 aa |
| Immediate neighbours | rsgI, ykrK |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU13470
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: alpha/beta-type SASP family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P04833
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: sspD PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190]
[WorldCat.org]
[DOI]
(P p)
I Bagyan, J Hobot, S Cutting
A compartmentalized regulator of developmental gene expression in Bacillus subtilis.
J Bacteriol: 1996, 178(15);4500-7
[PubMed:8755877]
[WorldCat.org]
[DOI]
(P p)
M J Connors, J M Mason, P Setlow
Cloning and nucleotide sequencing of genes for three small, acid-soluble proteins from Bacillus subtilis spores.
J Bacteriol: 1986, 166(2);417-25
[PubMed:3009398]
[WorldCat.org]
[DOI]
(P p)
