Difference between revisions of "LipC"
| Line 89: | Line 89: | ||
* '''Operon:''' | * '''Operon:''' | ||
| + | ** ''[[ycsF]]-[[ycsG]]-[[ycsI]]-[[kipI]]-[[kipA]]-[[kipR]]-[[ycsK]]'' {{PubMed|9334321}} | ||
| + | ** ''lipC'' (according to [http://dbtbs.hgc.jp/COG/prom/ycsFGI-kipIAR-ycsK.html DBTBS]) | ||
| − | * '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190,17220230}} | + | * '''[[Sigma factor]]:''' |
| + | ** ''lipC'': [[SigK]] {{PubMed|15699190,17220230}} | ||
| − | * '''Regulation:''' expressed four hours after onset of sporulation ([[GerE]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/17220230 PubMed] | + | * '''Regulation:''' |
| + | ** expressed four hours after onset of sporulation ([[GerE]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/17220230 PubMed] | ||
| − | * '''Regulatory mechanism:''' [[GerE]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/17220230 PubMed] | + | * '''Regulatory mechanism:''' |
| + | ** [[GerE]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/17220230 PubMed] | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 117: | Line 122: | ||
=References= | =References= | ||
| − | <pubmed> 17220230 </pubmed> | + | <pubmed> 17220230 9334321</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 19:08, 20 August 2009
- Description: lipase implicated in spore germination
| Gene name | lipC |
| Synonyms | ycsK |
| Essential | no |
| Product | lipase |
| Function | spore germination |
| MW, pI | 23 kDa, 5.839 |
| Gene length, protein length | 639 bp, 213 aa |
| Immediate neighbours | kipR, yczI |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU04110
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: 'GDSL' lipolytic enzyme family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: spore wall (according to Swiss-Prot), mother cell PubMed
Database entries
- Structure:
- UniProt: P42969
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Atsushi Masayama, Ritsuko Kuwana, Hiromu Takamatsu, Hisashi Hemmi, Tohru Yoshimura, Kazuhito Watabe, Ryuichi Moriyama
A novel lipolytic enzyme, YcsK (LipC), located in the spore coat of Bacillus subtilis, is involved in spore germination.
J Bacteriol: 2007, 189(6);2369-75
[PubMed:17220230]
[WorldCat.org]
[DOI]
(P p)
L Wang, R Grau, M Perego, J A Hoch
A novel histidine kinase inhibitor regulating development in Bacillus subtilis.
Genes Dev: 1997, 11(19);2569-79
[PubMed:9334321]
[WorldCat.org]
[DOI]
(P p)
