Difference between revisions of "YpwA"

From SubtiWiki
Jump to: navigation, search
(The protein)
Line 76: Line 76:
 
=== Database entries ===
 
=== Database entries ===
  
* '''Structure:'''
+
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=3QH2 3QH2] [http://www.ncbi.nlm.nih.gov/sites/entrez/19544567 PubMed]
  
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P50848 P50848]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P50848 P50848]

Revision as of 10:38, 2 July 2009

  • Description: carboxypeptidase, metalloprotease

Gene name ypwA
Synonyms
Essential no
Product M32 carboxypeptidase
Function unknown
MW, pI 58 kDa, 4.77
Gene length, protein length 1503 bp, 501 aa
Immediate neighbours xpt, kdgT
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YpwA context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU22080

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: M32 carboxypeptidase
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Marianne M Lee, Clara E Isaza, James D White, Rita P-Y Chen, George F-C Liang, Hannah T-F He, Sunney I Chan, Michael K Chan
Insight into the substrate length restriction of M32 carboxypeptidases: characterization of two distinct subfamilies.
Proteins: 2009, 77(3);647-57
[PubMed:19544567] [WorldCat.org] [DOI] (I p)