yfkR
168
part of the [protein|7CE0CAF27B1C0F507E783B8B80622270B00634FD|yfkQ]-[protein|B7EEC1910715507596734540D24B3C93B4B7065F|yfkR]-[protein|7A62875A659B9F0967C392F38895D9E15A29D559|yfkT] germinant receptor of unknown specificity
locus
BSU_07780
Molecular weight
42.64 kDa
pI
9.66
function
germination
product
part of the [protein|7CE0CAF27B1C0F507E783B8B80622270B00634FD|yfkQ]-[protein|B7EEC1910715507596734540D24B3C93B4B7065F|yfkR]-[protein|7A62875A659B9F0967C392F38895D9E15A29D559|yfkT] germinant receptor
essential
no
synonyms
yfkR
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG5903 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
847,498 → 848,652
The protein
Protein family
[wiki|GerABKC lipoprotein family] (according to UniProt)
Structure
[AF|O35028]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|7CE0CAF27B1C0F507E783B8B80622270B00634FD|yfkQ]-[gene|B7EEC1910715507596734540D24B3C93B4B7065F|yfkR]-[gene|AA76BEF6A4CECB5D3910918E8D91D8B919EDEA7E|yfkS]-[gene|7A62875A659B9F0967C392F38895D9E15A29D559|yfkT]
description
[Pubmed|22383849]
regulation
expressed during [wiki|sporulation] in the forespore [Pubmed|15699190]
sigma factors
[protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|sigG]: sigma factor, [Pubmed|15699190], in [regulon|protein:5F24258282F3166B7696B9E9ABC1706E4D06C944|sigG regulon]
Biological materials
Mutant
MGNA-C258 (yfkR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2256 NBRP B. subtilis, Japan]
BKE07780 (Δ[gene|B7EEC1910715507596734540D24B3C93B4B7065F|yfkR]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE07780 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ACAAATGAGAAGCGGCAAAA, downstream forward: _UP4_AGCCATTAATGGAGGTGCGT
BKK07780 (Δ[gene|B7EEC1910715507596734540D24B3C93B4B7065F|yfkR]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK07780 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ACAAATGAGAAGCGGCAAAA, downstream forward: _UP4_AGCCATTAATGGAGGTGCGT
References
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Time of last update: 2024-12-20 10:25:55
Author of last update: Melvin.boenninger