yueD
168
similar to sepiapterin reductase
locus
BSU_31840
Molecular weight
26.96 kDa
pI
6.43
function
unknown
product
unknown
essential
no
synonyms
yueD
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1028 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,265,406 → 3,266,137
The protein
Catalyzed reaction/ biological activity
(S)-benzoin + NADP+ --> benzil + H+ + NADPH (according to UniProt)
Protein family
[wiki|Short-chain dehydrogenases/reductases (SDR) family] (according to UniProt)
Structure
[PDB|5IF3] (from Burkholderia Vietnamiensis 34% identity)
[AF|O32099]
Expression and Regulation
Operons
genes
[gene|B258CA26B0EC2310475FCCD67F1F196857FC0004|yueD]
description
[Pubmed|22383849]
genes
[gene|50D2A03E2D7B5D461540FD157377E0D37F771888|yukE]-[gene|3CC3E197848E9688413C15CEA7DDCF0A7120A920|yukD]-[gene|3FE4A91C7D0B43C8704391F2F9493852B3AED9B0|essB]-[gene|6007664F3D979B4D8D4662C7F6E5CF2F489268E3|yukB]-[gene|0A38B2E900532C9950DE6E629F5EB21D64E18B55|yueB]-[gene|DA52C4CD130F32734E01A52F2F395127D2260F61|yueC]-[gene|B258CA26B0EC2310475FCCD67F1F196857FC0004|yueD]
description
[Pubmed|22383849]
regulation
expressed in the stationary phase [Pubmed|23861817]
expression is reduced in motile cells as compared to non-motile cells [pubmed|33782055]
regulatory mechanism
[protein|D343D2096664A972026D911E7A17A35C7B1CD1C9|degU]: activation, [protein|D343D2096664A972026D911E7A17A35C7B1CD1C9|degU]-P, [Pubmed|23861817], in [regulon|protein:D343D2096664A972026D911E7A17A35C7B1CD1C9|degU regulon]
sigma factors
[protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA]: sigma factor, [Pubmed|22383849], in [regulon|protein:360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA regulon]
Biological materials
Mutant
MGNA-B564 (yueD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1563 NBRP B. subtilis, Japan]
BKE31840 (Δ[gene|B258CA26B0EC2310475FCCD67F1F196857FC0004|yueD]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE31840 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGGAAACCTCCTTTTCC, downstream forward: _UP4_TAGAGCAGATATTTTCTGCT
BKK31840 (Δ[gene|B258CA26B0EC2310475FCCD67F1F196857FC0004|yueD]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK31840 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGGAAACCTCCTTTTCC, downstream forward: _UP4_TAGAGCAGATATTTTCTGCT
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Time of last update: 2025-03-17 02:12:36
Author of last update: Melvin.boenninger