yqkF

yqkF
168

NADPH-dependent 4-Hydroxy-2,3-trans-nonenal reductase

locus
BSU_23620
Molecular weight
34.56 kDa
pI
5.13
Protein length
306 aaSequenceBlast
Gene length
921 bpSequenceBlast
function
unknown
product
NADPH-dependent 4-Hydroxy-2,3-trans-nonenal reductase
essential
no
synonyms
yqkF
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0667 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,459,326 → 2,460,246
The protein
Protein family
[wiki|Aldo/keto reductase family] (according to UniProt)
[wiki|Aldo/keto reductase 2 subfamily] (according to UniProt)
[wiki|Cofactors]
NADPH [Pubmed|16242712]
Structure
[PDB|1YNP] (from ''B. halodurans'', 64% identity) [Pubmed|16242712]
[AF|P54569]
Paralogous protein(s)
[protein|F1AFFACD36C75702B0BB8F0B4241A9688FB6253C|iolS], (31,4%)
Expression and Regulation
Operons
genes
[gene|B0897643562CDB25547223CCB9CFD0F9E78710E2|yqkF]
description
(according to [http://dbtbs.hgc.jp/COG/prom/yqkF.html DBTBS]) null
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[gene|B0897643562CDB25547223CCB9CFD0F9E78710E2|yqkF]

2024-12-08 12:53:58

ghost

54

58da0d3ac16e5de87b85b1a8258af28b8013a7bb

0E62363AE5F64B7B2ABB8C15313F3BF8BAC31C18

genes
[gene|08EBBA57B807F8C27C37BEB275DF5E206935C698|mciZ]-[gene|B0897643562CDB25547223CCB9CFD0F9E78710E2|yqkF]
description
[pubmed|22383849]
regulation
expressed early during sporulation in the mother cell ([protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE]) [Pubmed|18284588]
sigma factors
[protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE]: sigma factor, [pubmed|18284588], in [regulon|protein:3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE regulon]
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[gene|08EBBA57B807F8C27C37BEB275DF5E206935C698|mciZ]->[gene|B0897643562CDB25547223CCB9CFD0F9E78710E2|yqkF]

2024-12-21 14:39:42

Bzhu

101

967768432342dae691cd487d95efb34337bc50c0

57B87E7274A471D290BA212F1369907CA258DFAC

Biological materials
Mutant
BKE23620 (Δ[gene|B0897643562CDB25547223CCB9CFD0F9E78710E2|yqkF]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE23620 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTGCACACTCCTTTTTT,  downstream forward: _UP4_TAGCAGAAAAACCAGCACCT
BKK23620 (Δ[gene|B0897643562CDB25547223CCB9CFD0F9E78710E2|yqkF]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK23620 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTGCACACTCCTTTTTT,  downstream forward: _UP4_TAGCAGAAAAACCAGCACCT

B0897643562CDB25547223CCB9CFD0F9E78710E2

Page visits: 1754

Time of last update: 2024-12-21 21:43:35

Author of last update: Melvin.boenninger