yisV
168
similar to transcriptional regulator ([wiki|MocR/ GabR family])
locus
BSU_10880
Molecular weight
54.11 kDa
pI
9.3
function
unknown
product
unknown
essential
no
synonyms
yisV, yisW
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1167 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
1,166,737 1,168,191
The protein
Protein family
[wiki|MocR/ GabR family] [Pubmed|22020104]
[wiki|class-I pyridoxal-phosphate-dependent aminotransferase family] (according to UniProt)
[wiki|Domains]
N-terminal DNA-binding helix-turn-helix motif; C-terminal domain is homologous to PLP-binding large domain of aminotransferases.
[wiki|HTH gntR-type domain] (aa 14-82) (according to UniProt)
[wiki|Cofactors]
PLP
Structure
[PDB|1WST] (aminotransferase from Thermococcus profundus, 29% identity)
[AF|Q796Q6]
Paralogous protein(s)
[protein|B1A95EAE40AFA40BF12EE9B41287921417A39562|ydfD]
Expression and Regulation
Operons
genes
[gene|6A3F08CD939CCDEC1F784D658B815A6D0E1AAC3D|yisV]
description
[pubmed|22383849]
Biological materials
Mutant
MGNA-B211 (yisW::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1210 NBRP B. subtilis, Japan]
BKE10880 ([gene|6A3F08CD939CCDEC1F784D658B815A6D0E1AAC3D|yisV]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE10880 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCCCCCCTTTTTTACAC, downstream forward: _UP4_CGCCTGATGATGTCCTAGGC
BKK10880 ([gene|6A3F08CD939CCDEC1F784D658B815A6D0E1AAC3D|yisV]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK10880 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCCCCCCTTTTTTACAC, downstream forward: _UP4_CGCCTGATGATGTCCTAGGC
References
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Time of last update: 2025-05-01 00:36:40
Author of last update: Melvin.boenninger