Potential protein homologs
Description
The following list presents the potential protein homologs for YpbD using FASTA alignment tool. For all top hits, a bidirectional analysis was performed and those showing the same pair of proteins are considered to be potential orthologs.
The column Best hit bidirectional informs if YpbD was found to be best hit in the alignment with the protein of the respective organism.
YpbD
| Organism | Protein name | Identity | Similarity | Bidirectional best hit |
| Bacillus licheniformis | BL02231 | 62.8% | 88.0% | Yes |
| Bacillus anthracis | A8C77_07635 | 44.2% | 78.2% | Yes |
| Listeria monocytogenes | No significant homolog | No significant homolog | ||
| Staphylococcus aureus | SAOUHSC_01900 | 30.1% | 63.9% | No |
| Lactococcus lactis | YxdF | 21.6% | 58.0% | No |
| Streptococcus pneumoniae | Spr0826 | 25.8% | 73.2% | No |
| Streptococcus pyogenes | GGS_1152 | 21.7% | 61.7% | No |
| Clostridium acetobutylicum | No significant homolog | No significant homolog | ||
| Mycoplasma pneumoniae | No significant homolog | No significant homolog | ||
| JCVI-syn3A | JCVISYN3A_0693 | 27.6% | 61.9% | No |
| Corynebacterium glutamicum | No significant homolog | No significant homolog | ||
| Streptomyces coelicolor | No significant homolog | No significant homolog | ||
| Escherichia coli | No significant homolog | No significant homolog | ||
| Synechocystis sp. | BAA18294 | 25.9% | 65.9% | Yes |
| Synechococcus elongatus | Synpcc7942_0340 | 30.7% | 62.8% | Yes |
| Borrelia burgdorferi | No significant homolog | No significant homolog |