xynA

xynA
168

GH11 family endo-1,4-beta-xylanase

locus
BSU_18840
Molecular weight
23.20 kDa
pI
9.64
Protein length
Gene length
function
xylan degradation
product
endo-1,4-beta-xylanase
essential
no
ec
3.2.1.8
synonyms
xynA

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms

This gene is a member of the following regulons

Gene
Coordinates
2,054,599 → 2,055,240
The protein
Catalyzed reaction/ biological activity
Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans resulting in the release of xylobiose and xylotriose [pubmed|34600889]
Protein family
glycosyl hydrolase 11 (cellulase G) family (single member, according to UniProt)
[wiki|Domains]
GH 11 domain (aa 29-213) (according to UniProt)
Structure
[PDB|2QZ3] (complex with xylotetraose),  [PDB|2Z79], [PDB|3EXU]
[AF|P18429]
[wiki|Localization]
extracellular (signal peptide) [Pubmed|18957862]
Expression and Regulation
Operons
genes
[gene|F97B0839946A7B457A203769D1C87A3E58A7BE33|xynA]
description
[Pubmed|8628241]
regulation
constitutively expressed [Pubmed|8012596]
sigma factors
[protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA]: sigma factor, [Pubmed|8628241], in [regulon|protein:360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA regulon]
additional information
A [protein|search|ncRNA] is predicted between '[protein|search|pps]' and '[protein|search|xynA]' [PubMed|20525796]
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[gene|F97B0839946A7B457A203769D1C87A3E58A7BE33|xynA]

2024-09-12 11:41:34

ghost

98

72578c9f5c7a648096b58a6ee3495abb7fe4f0be

EAC25ACDEA414BC427FB584E5A110DD603E277CE

Biological materials
Mutant
BKE18840 (Δ[gene|F97B0839946A7B457A203769D1C87A3E58A7BE33|xynA]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE18840 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATATGTTACCTCCTATAAT,  downstream forward: _UP4_TAACAGATCATCCTTAATCA
BKK18840 (Δ[gene|F97B0839946A7B457A203769D1C87A3E58A7BE33|xynA]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK18840 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATATGTTACCTCCTATAAT,  downstream forward: _UP4_TAACAGATCATCCTTAATCA
References
Reviews
20735481
Original Publications
19531602,8012596,18957862,19422059,19994888,20096384,20188130,21466172,8628241,20525796,21966517,21785938,24271172,21964501,23459129,25096197,26279676,26923808,26955749,28109807,31532988,33887137,34189729,34600889,38253842

F97B0839946A7B457A203769D1C87A3E58A7BE33

Page visits: 4755

Time of last update: 2024-10-05 20:15:19

Author of last update: Jstuelk