ytiB
168
similar to carbonic anhydrase
locus
BSU_30690
Molecular weight
20.97 kDa
pI
6.17
function
unknown
product
unknown
essential
no
ec
4.2.1.1
synonyms
ytiB
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG0288 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,138,321 → 3,138,884
The protein
Catalyzed reaction/ biological activity
H+ + hydrogencarbonate --> CO2 + H2O (according to UniProt)
Protein family
beta-class carbonic anhydrase family (with [protein|E00889289B07BE78CC0C8E0962A55C3B14871E00|yvdA] and [protein|5D96DF2F32050BBCEC3811843398FE84DE88F6DF|ybcF], according to UniProt)
Structure
[PDB|1G5C] (from Methanobacterium thermoautotrophicum, 34% identity) [pubmed|11096105]
[AF|O34872]
Paralogous protein(s)
[protein|E00889289B07BE78CC0C8E0962A55C3B14871E00|yvdA]
[protein|5D96DF2F32050BBCEC3811843398FE84DE88F6DF|ybcF], Array
Expression and Regulation
Operons
genes
[gene|F942C0F4618FACEF35ACA629355BAC288556E7B6|ytiB]-[gene|FF61DC6CA162EEC191CDFC802E721FCBD32EC098|luxS]
description
[pubmed|22383849]
sigma factors
[protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]: sigma factor, [Pubmed|26577401], in [regulon|protein:580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB regulon]
Biological materials
Mutant
MGNA-A293 (ytiB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/293 NBRP B. subtilis, Japan]
BKE30690 (Δ[gene|F942C0F4618FACEF35ACA629355BAC288556E7B6|ytiB]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE30690 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTCGTTGTCCCTTTCT, downstream forward: _UP4_CTTATCGTAAACGGTTATAA
BKK30690 (Δ[gene|F942C0F4618FACEF35ACA629355BAC288556E7B6|ytiB]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK30690 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTCGTTGTCCCTTTCT, downstream forward: _UP4_CTTATCGTAAACGGTTATAA
References
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Time of last update: 2024-10-12 05:25:22
Author of last update: Melvin.boenninger