yrdR
168
unknown
locus
BSU_26620
Molecular weight
35.76 kDa
pI
9.97
function
unknown
product
unknown
essential
no
ec
null
synonyms
yrdR
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG0697 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
2,720,687 → 2,721,652
The protein
Protein family
[wiki|EamA transporter family] (according to UniProt)
[wiki|Domains]
2 [wiki|EamA domain]s (aa 18-146, aa 175-300) (according to UniProt)
Structure
[AF|O07086]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|F47A2C0A7478485BDAF90FA873F4B1D1F7C74004|yrdR]-[gene|4E42C126368C8995971518F33933D39FFD52BF64|yrzO]
description
[pubmed|22383849]
sigma factors
[protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|sigF]: sigma factor, [pubmed|30782632], in [regulon|protein:CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|sigF regulon]
[protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|sigG]: sigma factor, [pubmed|30782632], in [regulon|protein:5F24258282F3166B7696B9E9ABC1706E4D06C944|sigG regulon]
Biological materials
Mutant
GP4622 (trpC2 xkdE::Pxyl-[gene|F47A2C0A7478485BDAF90FA873F4B1D1F7C74004|yrdR]-ermC), available in [wiki|Jörg Stülke]'s lab
MGNA-A860 (yrdR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/860 NBRP B. subtilis, Japan]
BKE26620 (Δ[gene|F47A2C0A7478485BDAF90FA873F4B1D1F7C74004|yrdR]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE26620 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGAATTCCCCTCCTTTT, downstream forward: _UP4_ACTTAGACAGTGGGGGATTT
BKK26620 (Δ[gene|F47A2C0A7478485BDAF90FA873F4B1D1F7C74004|yrdR]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK26620 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGAATTCCCCTCCTTTT, downstream forward: _UP4_ACTTAGACAGTGGGGGATTT
Page visits: 1944
Time of last update: 2024-12-26 06:11:21
Author of last update: Robert.warneke