ywoC
168
unknown
locus
BSU_36490
Molecular weight
20.97 kDa
pI
4.62
function
unknown
product
unknown
essential
no
synonyms
ywoC
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1335 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,755,291 → 3,755,860
The protein
Protein family
[wiki|Isochorismatase family] (according to UniProt)
Structure
[PDB|1J2R] (from E. coli, 46% identity)
[AF|P94573]
Expression and Regulation
Operons
genes
[gene|42FD1230682897172C3D4EA09980E566835EEF34|ywoB]-[gene|ECBA7A0C8E705A464ACF627EBAFF7482EAEE34F2|ywoC]-[gene|856247843F1073833D51F82AB2928CCDC0DA3E64|ywoD]
description
[Pubmed|21856850]
regulation
induced by ramoplanin ([protein|search|YtrA]) [Pubmed|21856850]
regulatory mechanism
[protein|6A074CE9AD98A2751A216A2EA8156ACE6FFC7280|ytrA]: repression, [Pubmed|21856850], in [regulon|protein:6A074CE9AD98A2751A216A2EA8156ACE6FFC7280|ytrA regulon]
sigma factors
[protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA]: sigma factor, [Pubmed|21856850], in [regulon|protein:360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA regulon]
Biological materials
Mutant
MGNA-A932 (ywoC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/932 NBRP B. subtilis, Japan]
BKE36490 (Δ[gene|ECBA7A0C8E705A464ACF627EBAFF7482EAEE34F2|ywoC]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE36490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACGTCTCCTCCTGATAC, downstream forward: _UP4_GAGTTTCTGGAACAAGTGAA
BKK36490 (Δ[gene|ECBA7A0C8E705A464ACF627EBAFF7482EAEE34F2|ywoC]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK36490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACGTCTCCTCCTGATAC, downstream forward: _UP4_GAGTTTCTGGAACAAGTGAA
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Time of last update: 2024-12-21 20:34:12
Author of last update: Jstuelk