yjkB

yjkB
168

similar to amino acid [wiki|ABC transporter ]([metabolite|ATP]-binding protein)

locus
BSU_12250
Molecular weight
27.67 kDa
pI
5.56
Protein length
Gene length
function
unknown
product
[wiki|ABC transporter ](ATP-binding protein)
essential
no
synonyms
yjkB

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1117 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,295,748 → 1,296,500
The protein
Protein family
[wiki|ABC transporter superfamily] (according to UniProt)
[wiki|Domains]
[wiki|ABC transporter domain] (aa 13-245) (according to UniProt)
Structure
[PDB|4YMS] (from  Caldanaerobacter subterraneus, 35% identity) [pubmed|25848002]
[AF|O34756]
[wiki|Localization]
associated to the membrane (via [protein|6C432E77C5A6F9955DDF4F7BE3FFD55C30BB812A|yjkA]) [Pubmed|10092453]
Expression and Regulation
Operons
genes
[gene|E93AE502A575BFB185A5D782B2F40AD53B27093E|yjkB]-[gene|6C432E77C5A6F9955DDF4F7BE3FFD55C30BB812A|yjkA]
description
[pubmed|22383849]
Open in new tab

[gene|E93AE502A575BFB185A5D782B2F40AD53B27093E|yjkB]→[gene|6C432E77C5A6F9955DDF4F7BE3FFD55C30BB812A|yjkA]

2024-11-11 14:11:52

Jstuelk

71

08cf57917bda744102fa390c47bb214b18bb9ec3

67B8EA9D88E677078C3B96DABF8D3843B48D6B4A

Biological materials
Mutant
MGNA-A362 (yjkB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/362 NBRP B. subtilis, Japan]
BKE12250 (Δ[gene|E93AE502A575BFB185A5D782B2F40AD53B27093E|yjkB]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE12250 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTACAATAATCACCTTTC,  downstream forward: _UP4_TTTTTGAAGGGAGGCACTCG
BKK12250 (Δ[gene|E93AE502A575BFB185A5D782B2F40AD53B27093E|yjkB]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK12250 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTACAATAATCACCTTTC,  downstream forward: _UP4_TTTTTGAAGGGAGGCACTCG
References
36815589,10092453,25848002

E93AE502A575BFB185A5D782B2F40AD53B27093E

Page visits: 1988

Time of last update: 2024-12-04 23:18:31

Author of last update: Jstuelk