ykgA

ykgA
168

similar to arginine-guanidine removing enzyme, general stress protein, survival of salt and ethanol stresses

locus
BSU_13020
Molecular weight
29.49 kDa
pI
4.83
Protein length
Gene length
function
survival of salt and ethanol stresses
product
unknown
essential
no
ec
null
synonyms
ykgA

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1834 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,371,015 → 1,371,875
The protein
Protein family
DDAH family (single member, according to UniProt)
Structure
[PDB|6LRG] (arginine-guanidine removing enzyme from Escherichia coli, corresponds to aa 23 ... 280, 26% identity) [pubmed|32198136]
[AF|O34497]
Expression and Regulation
Operons
genes
[gene|E8ECEFF86ABD1A2BE439F3CAD5A7C5BB58C4BF8E|ykgA]-[gene|491B5E27EF3190D307EC43C3BB12490728E39333|ykgB]
description
[Pubmed|10482513]
regulation
induced by stress ([protein|search|SigB]) [Pubmed|10482513]
sigma factors
[protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]: sigma factor, [Pubmed|10482513], in [regulon|protein:580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB regulon]
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[gene|E8ECEFF86ABD1A2BE439F3CAD5A7C5BB58C4BF8E|ykgA]→[gene|491B5E27EF3190D307EC43C3BB12490728E39333|ykgB]

2024-11-23 07:40:49

ghost

54

a39b40eeb2284f606e51d9812a8414feff4018bd

FEDFF840442A24C5B146C9952E5EF42339E13918

Biological materials
Mutant
MGNA-A753 (ykgA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/753 NBRP B. subtilis, Japan]
BKE13020 (Δ[gene|E8ECEFF86ABD1A2BE439F3CAD5A7C5BB58C4BF8E|ykgA]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE13020 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTGTTTTTCCTCCTAAA,  downstream forward: _UP4_TGAAGAATCTTCCCCTTTTT
BKK13020 (Δ[gene|E8ECEFF86ABD1A2BE439F3CAD5A7C5BB58C4BF8E|ykgA]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK13020 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTGTTTTTCCTCCTAAA,  downstream forward: _UP4_TGAAGAATCTTCCCCTTTTT
References
15805528,10482513,32198136

E8ECEFF86ABD1A2BE439F3CAD5A7C5BB58C4BF8E

Page visits: 1925

Time of last update: 2024-12-06 05:26:37

Author of last update: Jstuelk