ykgA
168
similar to arginine-guanidine removing enzyme, general stress protein, survival of salt and ethanol stresses
locus
BSU_13020
Molecular weight
29.49 kDa
pI
4.83
function
survival of salt and ethanol stresses
product
unknown
essential
no
ec
null
synonyms
ykgA
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1834 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
1,371,015 → 1,371,875
The protein
Protein family
DDAH family (single member, according to UniProt)
Structure
[PDB|6LRG] (arginine-guanidine removing enzyme from Escherichia coli, corresponds to aa 23 ... 280, 26% identity) [pubmed|32198136]
[AF|O34497]
Expression and Regulation
Operons
genes
[gene|E8ECEFF86ABD1A2BE439F3CAD5A7C5BB58C4BF8E|ykgA]-[gene|491B5E27EF3190D307EC43C3BB12490728E39333|ykgB]
description
[Pubmed|10482513]
regulation
induced by stress ([protein|search|SigB]) [Pubmed|10482513]
sigma factors
[protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]: sigma factor, [Pubmed|10482513], in [regulon|protein:580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB regulon]
Biological materials
Mutant
MGNA-A753 (ykgA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/753 NBRP B. subtilis, Japan]
BKE13020 (Δ[gene|E8ECEFF86ABD1A2BE439F3CAD5A7C5BB58C4BF8E|ykgA]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE13020 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGTTTTTCCTCCTAAA, downstream forward: _UP4_TGAAGAATCTTCCCCTTTTT
BKK13020 (Δ[gene|E8ECEFF86ABD1A2BE439F3CAD5A7C5BB58C4BF8E|ykgA]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK13020 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGTTTTTCCTCCTAAA, downstream forward: _UP4_TGAAGAATCTTCCCCTTTTT
References
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Time of last update: 2024-12-29 13:34:55
Author of last update: Jstuelk