ykzQ

ykzQ
168

similar to potassium binding protein

locus
BSU_13789
Molecular weight
8.00 kDa
pI
9
Protein length
Gene length
function
unknown
product
unknown
essential
-
synonyms
ykzQ

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1388 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,445,314 → 1,445,541
The protein
[wiki|Domains]
contains a N-acetylglucosamine-polymer-binding [wiki|LysM domain] [Pubmed|18430080]
[wiki|LysM domain] (aa 29-72) (according to UniProt)
Structure
[PDB|5FIM] (from E. coli, 36% identity) [pubmed|27112601]
[AF|C0H403]
[wiki|Localization]
outer spore coat
Expression and Regulation
Operons
genes
[gene|FC4C5377EF1D794DCB19D0A8AFE958B84BD9C8BE|ykvP]-[gene|E8311435A86835799E9093DD9CF3733CFFF18DCC|ykzQ]-[gene|BC8CBFF0C2F3C2BEE3275E2CB65D41F2AFC0A1CD|ykvQ]
description
[Pubmed|11011148,22383849]
regulation
expressed late during sporulation in the mother cell ([protein|search|SigK]) [Pubmed|11011148,15699190]
sigma factors
[protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|sigK]: sigma factor, [Pubmed|11011148,15699190], in [regulon|protein:24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|sigK regulon]
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[gene|FC4C5377EF1D794DCB19D0A8AFE958B84BD9C8BE|ykvP]→[gene|BC8CBFF0C2F3C2BEE3275E2CB65D41F2AFC0A1CD|ykvQ]

2024-12-08 17:28:09

Bzhu

52

fc160203ba65f29e339dbfed5b952adb6d5d5c06

53327784F660AC3DC8C28FB4B2EDE6238330AB4D

genes
[gene|E8311435A86835799E9093DD9CF3733CFFF18DCC|ykzQ]
description
[pubmed|22383849]
regulatory mechanism
[protein|19228BAD44E6DA3DE908DC390FDF628C18D94E65|gerE]: activation, [Pubmed|26577401], in [regulon|protein:19228BAD44E6DA3DE908DC390FDF628C18D94E65|gerE regulon]
sigma factors
[protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|sigK]: sigma factor, [Pubmed|26577401], in [regulon|protein:24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|sigK regulon]
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[gene|E8311435A86835799E9093DD9CF3733CFFF18DCC|ykzQ]

2024-12-09 13:37:11

Bzhu

71

37c907987a1ce6d7c66a1e920669a90988b05196

98D44D4A686184339B27B634837EF033B758365C

Biological materials
Mutant
BKE13789 (Δ[gene|E8311435A86835799E9093DD9CF3733CFFF18DCC|ykzQ]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE13789 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CCCCTTCATTCATATTACTC,  downstream forward: _UP4_TAATCTTTGAGGTTTCGGAA
BKK13789 (Δ[gene|E8311435A86835799E9093DD9CF3733CFFF18DCC|ykzQ]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK13789 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CCCCTTCATTCATATTACTC,  downstream forward: _UP4_TAATCTTTGAGGTTTCGGAA
References
18430080,26577401,27766092,27112601

E8311435A86835799E9093DD9CF3733CFFF18DCC

Page visits: 2701

Time of last update: 2024-12-21 22:49:55

Author of last update: Melvin.boenninger