ydaT
168
general stress protein, survival of ethanol stress and low temperatures, may be involved in DNA damage repair
locus
BSU_04380
Molecular weight
16.42 kDa
pI
5.97
function
survival of ethanol stress and low temperatures
product
unknown
essential
no
ec
null
synonyms
ydaT
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG4876 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
492,989 → 493,441
The protein
Catalyzed reaction/ biological activity
binds to 8-oxoG and abasic DNA lesions [pubmed|37250769]
Structure
[AF|P96595]
Expression and Regulation
Operons
genes
[gene|E30C92E8D0CC56F7406B87B7EA25B7C41086DD73|ydaT]-[gene|7601A53CE6A8AD417AADBED3199DB46B285D9059|ydaS]
description
[Pubmed|10482513]
regulation
induced by stress ([protein|search|SigB]) [Pubmed|15805528]
sigma factors
[protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]: sigma factor, [Pubmed|10482513], in [regulon|protein:580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB regulon]
Biological materials
Mutant
MGNA-C091 (ydaT::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2089 NBRP B. subtilis, Japan]
BKE04380 (Δ[gene|E30C92E8D0CC56F7406B87B7EA25B7C41086DD73|ydaT]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE04380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCTATCACTCCTTTTC, downstream forward: _UP4_TAAAGGAATATGCTTTCAAG
BKK04380 (Δ[gene|E30C92E8D0CC56F7406B87B7EA25B7C41086DD73|ydaT]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK04380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCTATCACTCCTTTTC, downstream forward: _UP4_TAAAGGAATATGCTTTCAAG
References
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Time of last update: 2024-12-30 03:26:35
Author of last update: Jstuelk