ybxI
168
beta-lactamase
locus
BSU_02090
Molecular weight
30.49 kDa
pI
6.84
function
unknown
product
beta-lactamase
essential
no
ec
3.5.2.6
synonyms
ybxI, ybdS
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG2602 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
228,549 → 229,352
The protein
Catalyzed reaction/ biological activity
β-lactam + H2O --> substituted β-amino acid (according to UniProt)
Protein family
[wiki|beta-lactamase family] (according to UniProt)
class-D beta-lactamase family (single member, according to UniProt)
Structure
[PDB|5E2F]
[AF|P54427]
[wiki|Localization]
extracellular (signal peptide) [Pubmed|18957862]
Expression and Regulation
Operons
genes
[gene|E1CBB22683967FA47CB5886755BC3C3BFE6CC499|ybxI]
description
[Pubmed|22383849]
Biological materials
Mutant
MGNA-B962 (ybxI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1961 NBRP B. subtilis, Japan]
BKE02090 (Δ[gene|E1CBB22683967FA47CB5886755BC3C3BFE6CC499|ybxI]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE02090 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTGTTCTCCCCTTCGT, downstream forward: _UP4_TAAATAAAAGAGCCCTGCAC
BKK02090 (Δ[gene|E1CBB22683967FA47CB5886755BC3C3BFE6CC499|ybxI]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK02090 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTGTTCTCCCCTTCGT, downstream forward: _UP4_TAAATAAAAGAGCCCTGCAC
References
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Time of last update: 2025-04-18 02:33:06
Author of last update: Melvin.boenninger