ybfQ
168
unknown
locus
BSU_02330
Molecular weight
37.11 kDa
pI
4.91
function
unknown
product
unknown
essential
no
synonyms
ybfQ, trhO
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1054 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
252,514 → 253,482
The protein
Protein family
UPF0176 family (single member, according to UniProt)
[wiki|Domains]
[wiki|Rhodanese domain] (aa 125-219) (according to UniProt)
Structure
[PDB|4F67] (from Legionella pneumophila, corresponds to aa 10 ... 234, 41% identity)
[AF|O31457]
Expression and Regulation
Operons
genes
[gene|BA60CF44ECA4937FA5C1720B10E7FDABA9AB4664|ybfO]-[gene|1EE8BF589ECDFD5194C86E02A627CCF81899B904|ybfP]-[gene|E06787B6AAD11070751938822F75359CE6EF299C|ybfQ]
description
[Pubmed|12207695]
regulation
repressed during logarithmic growth ([protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]) [Pubmed|18840696]
regulatory mechanism
[protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]: repression, [Pubmed|18840696,20817675], in [regulon|protein:E5110D9C36E8C55AFD1419987B14A53232165F20|abrB regulon]
sigma factors
[protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|sigW]: sigma factor, [Pubmed|11866510,12207695], in [regulon|protein:3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|sigW regulon]
Biological materials
Mutant
MGNA-B936 (ybfQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1935 NBRP B. subtilis, Japan]
BKE02330 (Δ[gene|E06787B6AAD11070751938822F75359CE6EF299C|ybfQ]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE02330 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTTAAACACCCTGTT, downstream forward: _UP4_TAAAAAAAGAACACCTCGTA
BKK02330 (Δ[gene|E06787B6AAD11070751938822F75359CE6EF299C|ybfQ]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK02330 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTTAAACACCCTGTT, downstream forward: _UP4_TAAAAAAAGAACACCTCGTA
References
Page visits: 1962
Time of last update: 2024-12-25 23:30:16
Author of last update: Robert.warneke