yybD
168
similar to GCN5-related N-acetyltransferase
locus
BSU_40680
Molecular weight
16.42 kDa
pI
6.16
function
unknown
product
unknown
essential
no
synonyms
yybD
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG2153 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
4,181,456 → 4,181,899
The protein
Protein family
UPF0039 (ElaA) family (single member, according to UniProt)
[wiki|Domains]
[wiki|N-acetyltransferase domain] (aa 1-144) (according to UniProt)
Structure
[PDB|1Q2Y] (YjcF, 47% identity)
[AF|P37500]
Paralogous protein(s)
[protein|AD0F95A25190DA7E253F4C93BC160B1EA91AAE04|yyaT], [protein|5E4C3ADF5B5D0215E9E350F16BCA57B208933606|yjcF]
Expression and Regulation
Operons
genes
[gene|9EC2800AF5B2B65BE3DEB4ABCCE7E448A24440DF|yybE]-[gene|DBEB1E43E1121D3D8AB6A0CA3BAF4072715F6577|yybD]-[gene|33C3EDF3709AC835C9C50B1B7978BA7C23EC9B9E|yybC]
description
[pubmed|22383849]
Biological materials
Mutant
MGNA-B850 (yybD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1849 NBRP B. subtilis, Japan]
BKE40680 (Δ[gene|DBEB1E43E1121D3D8AB6A0CA3BAF4072715F6577|yybD]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE40680 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTGACATTCATGCTTGAAT, downstream forward: _UP4_TAGATTGTTCACAAATTTGT
BKK40680 (Δ[gene|DBEB1E43E1121D3D8AB6A0CA3BAF4072715F6577|yybD]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK40680 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTGACATTCATGCTTGAAT, downstream forward: _UP4_TAGATTGTTCACAAATTTGT
Page visits: 1863
Time of last update: 2025-04-06 04:00:35
Author of last update: Melvin.boenninger