yocR
168
similar to sodium-dependent transporter
locus
BSU_19340
Molecular weight
48.17 kDa
pI
9.59
function
unknown
product
unknown
essential
no
synonyms
yocR
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG0733 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
2,104,934 → 2,106,271
The protein
Protein family
sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family (with [protein|FF16BA2B744E89AADB00F936B9A50A82726312A7|yhdH], according to UniProt)
Structure
[PDB|4US4] (the protein from ''B. halodurans'', 45% identity, 77% similarity) [Pubmed|25282149]
[AF|O34383]
Paralogous protein(s)
[protein|FF16BA2B744E89AADB00F936B9A50A82726312A7|yhdH]
[wiki|Localization]
membrane associated [Pubmed|18763711]
Expression and Regulation
Operons
genes
[gene|D5A30C841A142B49C50A38936802D0F60485DD7C|yocR]
description
[Pubmed|22383849]
Biological materials
Mutant
MGNA-B419 (yocR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1418 NBRP B. subtilis, Japan]
BKE19340 (Δ[gene|D5A30C841A142B49C50A38936802D0F60485DD7C|yocR]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE19340 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACCGTATCACTCCTATTTG, downstream forward: _UP4_TAACACACGAAGCCCCCGAG
BKK19340 (Δ[gene|D5A30C841A142B49C50A38936802D0F60485DD7C|yocR]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK19340 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACCGTATCACTCCTATTTG, downstream forward: _UP4_TAACACACGAAGCCCCCGAG
References
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Time of last update: 2024-12-21 14:27:09
Author of last update: Melvin.boenninger