atpB
168
ATP synthase, part of the Fo complex (subunit a)
locus
BSU_36870
Molecular weight
26.90 kDa
pI
9.36
function
ATP synthesis
product
ATP synthase (subunit a))
essential
no
synonyms
atpB
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG0356 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,786,878 → 3,787,612
The protein
Catalyzed reaction/ biological activity
ATP synthesis [http://www.youtube.com/watch?v=uOoHKCMAUMc see a video]
Protein family
ATPase A chain family (single member, according to UniProt)
Structure
[PDB|5T4O] (ATPase from E. coli, 31% identity) [pubmed|28001127]
[AF|P37813]
Effectors of protein activity
ATPase activity is inhibited upon binding of Mg-ADP to [protein|2A566C2CF8F7B86E05EEF4B7A268E8C102070025|atpD] [pubmed|30580998]
[wiki|Localization]
membrane [Pubmed|18763711]
Expression and Regulation
Operons
genes
[gene|8027AD5C3A92FB9B70E42C119FDEC697A64618C4|atpI]-[gene|CC1894D90AC17487A286B2909964916825055F93|atpB]-[gene|6CF7F6303425D8A51E1E01BF18823139E4259A8F|atpE]-[gene|87311FEA265AD3F5526C78D631E7E51BBF01F0D6|atpF]-[gene|E956A30D97B2941108880F3AD48620C4DB6E0EBD|atpH]-[gene|E3FADE979CE6AB6315F67812608FCE00CF4E2453|atpA]-[gene|492EEC8068043DA770F5DC1D54799C4366AE9A01|atpG]-[gene|2A566C2CF8F7B86E05EEF4B7A268E8C102070025|atpD]-[gene|A9DA64F8C7A60E8E2B1EDC99BEA1BD7DD0135AA6|atpC]
description
[Pubmed|9353933]
regulation
[protein|CEE73284EFC0DBE8870CE0B474922DED79475A57|rel] dependent downregulation (Class I) during stringent response [Pubmed|11948165]
the mRNA is processed between [gene|8027AD5C3A92FB9B70E42C119FDEC697A64618C4|atpI] and [gene|CC1894D90AC17487A286B2909964916825055F93|atpB] by [protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y], this requires the [protein|EE52DFA35B935E551871D079A9BE877DB2001A3B|ricA]-[protein|6C9A092F38739A3759793EF8B496569CD02C2E3F|ricF]-[protein|EBD15C174A03B7FCDFFE4C5DB5D86E93F1B9CAC4|ricT] complex [Pubmed|29794222]
regulatory mechanism
stringent response: negative regulation, in [regulon|other_regulator:stringent response|stringent response]
Biological materials
Mutant
GP4499 (trpC2 Δ[gene|CC1894D90AC17487A286B2909964916825055F93|atpB]::neo), available in [wiki|Jörg Stülke]'s lab
BKE36870 (Δ[gene|CC1894D90AC17487A286B2909964916825055F93|atpB]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE36870 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAAGGGTTTTCACCTCTCT, downstream forward: _UP4_TAAAACATTATATCCAAACG
BKK36870 (Δ[gene|CC1894D90AC17487A286B2909964916825055F93|atpB]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK36870 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAAGGGTTTTCACCTCTCT, downstream forward: _UP4_TAAAACATTATATCCAAACG
References
Reviews
Original Publications
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Time of last update: 2024-10-04 09:46:08
Author of last update: Robert.warneke