ycgG
168
unknown
locus
BSU_03100
Molecular weight
29.04 kDa
pI
9.19
function
unknown
product
unknown
essential
no
synonyms
ycgG
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG3403 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
335,329 → 336,090
The protein
Protein family
DcsA family (with [protein|0B5A1E73710CF6A158925CC51E170BA7BEF3B495|yqcI], according to UniProt)
Structure
[AF|P94382]
Paralogous protein(s)
[protein|0B5A1E73710CF6A158925CC51E170BA7BEF3B495|yqcI]
Expression and Regulation
Operons
genes
[gene|D948867BAEF91943250714453A474B90AB64E523|ycgE]-[gene|78B3F9580DED32469ACF537F4B40C7DBF0D4D995|ycgF]-[gene|CBEC4D299232FC5FCB57211525404CBD42D5AF68|ycgG]
description
[Pubmed|22383849]
genes
[gene|78B3F9580DED32469ACF537F4B40C7DBF0D4D995|ycgF]-[gene|CBEC4D299232FC5FCB57211525404CBD42D5AF68|ycgG]
description
[Pubmed|22383849]
genes
[gene|CBEC4D299232FC5FCB57211525404CBD42D5AF68|ycgG]
description
[Pubmed|12662922]
regulation
subject to negative regulation by [wiki|SpoIIID] [Pubmed|15383836]
sigma factors
[protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE]: sigma factor, [Pubmed|12662922], in [regulon|protein:3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE regulon]
Biological materials
Mutant
MGNA-B988 (ycgG::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1987 NBRP B. subtilis, Japan]
GP1851 (Δ[gene|CBEC4D299232FC5FCB57211525404CBD42D5AF68|ycgG]::aphA3)), available in [wiki|Jörg Stülke]'s lab [Pubmed|25092907]
BKE03100 (Δ[gene|CBEC4D299232FC5FCB57211525404CBD42D5AF68|ycgG]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE03100 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGATCCACCTCCAGTAT, downstream forward: _UP4_AACATGTTCAACAAAATGAA
BKK03100 (Δ[gene|CBEC4D299232FC5FCB57211525404CBD42D5AF68|ycgG]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK03100 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGATCCACCTCCAGTAT, downstream forward: _UP4_AACATGTTCAACAAAATGAA
Expression vectors
IPTG inducible expression of Strep-''ycgG'' in ''E. coli'': pGP2578 (in [wiki|pGP172]), available in [wiki|Jörg Stülke]'s lab
References
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Time of last update: 2024-12-21 14:43:16
Author of last update: Melvin.boenninger