ydfH

ydfH
168

two-component sensor kinase, control of ydfJ expression

Locus
BSU_05410
Molecular weight
46.34 kDa
Isoelectric point
9.6
Protein length
407 aaSequenceBlast
Gene length
1224 bpSequenceBlast
Function
control of ydfJ expression
Product
two-component sensor kinase (NarL family)
Essential
no
E.C.
null
Synonyms
ydfH
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG4585 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
587,744 → 588,967
The protein
Catalyzed reaction/ biological activity
autophosphorylation, phosphorylation of YdfI
ATP + protein L-histidine --> ADP + protein N-phospho-L-histidine (according to UniProt)
Domains
4 transmembrane segments
Histidine kinase domain (aa 201-402) (according to UniProt)
Structure
5IUN (PDB) (DesK, C-terminal Histidine kinase domain, 28% identity) PubMed
P96685 (AlphaFold)
Modification
autophosphorylation on a His residue
Localization
cell membrane (according to UniProt)
Expression and Regulation
Operons
Genes
ydfH-ydfI
Description
PubMed
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ydfH→ydfI

2025-04-24 20:04:19

ghost

107

f26084e95d34ac9ca538739cbbe65845a203d81d

4EECCA8F59C822E9AD4F1E1A51CBD5C226501351

Biological materials
Mutant
MGNA-C300 (ydfH::erm), available at the NBRP B. subtilis, Japan
BKE05410 (ΔydfH::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAAACCTTATCCACTTCCTT,  downstream forward: _UP4_AAGATGAATAAGGTTTTAAT
BKK05410 (ΔydfH::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAAACCTTATCCACTTCCTT,  downstream forward: _UP4_AAGATGAATAAGGTTTTAAT
References
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C86BAEE3DC97A96EFB85A0E2DF44AD69ED04744C

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Time of last update: 2025-04-25 16:01:05

Author of last update: Jstuelk