yybP
168
membrane protein, may be involved in manganese detoxification
locus
BSU_40560
Molecular weight
15.83 kDa
pI
4.24
function
unknown
product
unknown
essential
no
synonyms
yybP
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms
This gene is a member of the following regulons
Gene
Coordinates
4,169,166 → 4,169,612
The protein
Structure
[PDB|3LLL] (from the mouse, 28% identity) [pubmed|20471395]
[AF|P37488]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|BD3A3D84AD3A21B634B8EBAF684B690FE02BD857|yybP]
description
[Pubmed|25794618]
regulation
induced in the presence of Mn2+ ([wiki|yybP-ykoY motif]) [Pubmed|25794618]
the [wiki|RNA switch] RNA is degraded by [protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y] [pubmed|29794222]
regulatory mechanism
yybP-ykoY motif: RNA switch, in the presence of the ligand Mn2+ [Pubmed|25794618], in [regulon|other_regulator:yybP-ykoY motif|yybP-ykoY motif]
Biological materials
Mutant
MGNA-B838 (yybP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1837 NBRP B. subtilis, Japan]
BKE40560 (Δ[gene|BD3A3D84AD3A21B634B8EBAF684B690FE02BD857|yybP]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE40560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTCAGCCCCCTCATCG, downstream forward: _UP4_TAAGAAAAAGCATCCCGACG
BKK40560 (Δ[gene|BD3A3D84AD3A21B634B8EBAF684B690FE02BD857|yybP]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK40560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTCAGCCCCCTCATCG, downstream forward: _UP4_TAAGAAAAAGCATCCCGACG
References
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Time of last update: 2024-12-26 04:42:40
Author of last update: Melvin.boenninger