ywdJ
168
unknown
locus
BSU_37940
Molecular weight
49.81 kDa
pI
10.02
function
unknown
product
unknown
essential
no
ec
null
synonyms
ywdJ, ipa-60d
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG2233 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,894,463 → 3,895,785
The protein
Protein family
[wiki|xanthine/uracil permease family] (according to UniProt)
[wiki|Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily] (according to UniProt)
Structure
[AF|P39618]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|F267C75289D19D039F6E97F5DABCDFF0B4E4B8FA|ywdI]-[gene|BA4D8EF5B09345E94EEEEB936C803B71340DC5EE|ywdJ]-[gene|386D4F640E987E3752BEBE57BF25DF487D12EFCE|ywdK]
description
[Pubmed|12823818]
regulation
repressed in the absence of good nitrogen sources (glutamine or ammonium) ([protein|search|TnrA]) [Pubmed|12823818]
regulatory mechanism
[protein|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20|tnrA]: repression, [Pubmed|12823818], in [regulon|protein:857EF1AC54DEA0690C01B7F8CEFFD16312C58F20|tnrA regulon]
Biological materials
Mutant
MGNA-A565 (ywdJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/565 NBRP B. subtilis, Japan]
BKE37940 (Δ[gene|BA4D8EF5B09345E94EEEEB936C803B71340DC5EE|ywdJ]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE37940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTCACGTAAGCTCAACCTC, downstream forward: _UP4_TGAATTTTGGTGCAGGTGCG
BKK37940 (Δ[gene|BA4D8EF5B09345E94EEEEB936C803B71340DC5EE|ywdJ]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK37940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTCACGTAAGCTCAACCTC, downstream forward: _UP4_TGAATTTTGGTGCAGGTGCG
BP1259 ([gene|BA4D8EF5B09345E94EEEEB936C803B71340DC5EE|ywdJ]::cat trp+) available in [wiki|Jörg Stülke]'s & [wiki|Fabian Commichau]'s lab
References
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Time of last update: 2024-12-14 00:08:05
Author of last update: Melvin.boenninger