ydfS

ydfS
168

required for wet heat resistance of spores

locus
BSU_05540
Molecular weight
26.96 kDa
pI
8.45
Protein length
Gene length
function
stabilization of spore inner membrane proteins against wet heat
product
unknown
essential
no
synonyms
ydfS

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2323 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
601,019 → 601,726
Phenotypes of a mutant
reduced wet heat resistance [pubmed|37113233]
deficient in spore germination in response to AGFK [pubmed|37113233]
The protein
Protein family
[wiki|UPF0702 family] (according to UniProt)
Structure
[PDB|3C6F] ([protein|EBD0F966FD7B3662814D530064BD307561A5CB15|yetF], corresponds to aa 81 ... 230, 36% identity)
[AF|P96697]
Paralogous protein(s)
[protein|EBD0F966FD7B3662814D530064BD307561A5CB15|yetF]
[wiki|Localization]
inner spore membrane [pubmed|37113233]
Expression and Regulation
Operons
genes
[gene|B37938C639FC87DAA72AA82998DA8DF25E63CF37|ydfS]
description
[Pubmed|16497325]
regulation
expressed during sporulation in the forespore ([protein|search|SigG]) [Pubmed|16497325]
sigma factors
[protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|sigG]: sigma factor, [Pubmed|16497325], in [regulon|protein:5F24258282F3166B7696B9E9ABC1706E4D06C944|sigG regulon]
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[gene|B37938C639FC87DAA72AA82998DA8DF25E63CF37|ydfS]

2024-09-06 19:43:47

ghost

54

d02321d16138757bedf429b14c146381249382c2

A0298BD9AC48A4AA5768B327E935C706BAFCBE26

Biological materials
Mutant
MGNA-C156 (ydfS::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2154 NBRP B. subtilis, Japan]
BKE05540 (Δ[gene|B37938C639FC87DAA72AA82998DA8DF25E63CF37|ydfS]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE05540 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTTATGGCGCTCCCCGC,  downstream forward: _UP4_AAGGAATGAAGGAACAATCA
BKK05540 (Δ[gene|B37938C639FC87DAA72AA82998DA8DF25E63CF37|ydfS]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK05540 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTTATGGCGCTCCCCGC,  downstream forward: _UP4_AAGGAATGAAGGAACAATCA
References
16497325,35638784,37113233

B37938C639FC87DAA72AA82998DA8DF25E63CF37

Page visits: 1965

Time of last update: 2024-10-03 11:15:57

Author of last update: Jstuelk